Ghulam Murtaza

Sixth year Ph.D. student at Brown University.

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I am a sixth-year Ph.D. student (expected graduation date of spring 2025) at Brown University, and Dr. Ritambhara Singh currently advises me. I am interested in developing graph-based representations that combine (both bulk and single-cell) sequential genomic measurements with structural measurements that allow us to solve various downstream tasks. For my research, I typically develop graph-based deep-learning frameworks, and recently, I have been building pretrained backbone models that align sequential and structural genomics data modalities in a shared representation space using contrastive learning-based approaches.

I also worked with Theophilus Benson at Brown, we built a benchmarking platform to causally identify bottlenecks in the webpage loading process.

Before joining Brown, I was at Lahore University of Management Sciences (LUMS), where I earned my bachelor’s in computer science. At LUMS I was also involved in various research projects aimed at ensuring fair and equal access to resources available on the Internet.

news

Jul 12, 2024 Our paper scGrapHiC was nominated for Ian Lawson Van Toch Best Paper Award!
Jul 12, 2024 Attended ISMB 2024 and presented scGrapHiC: Deep learning-based graph deconvolution for Hi-C using single cell gene expression!
Apr 29, 2024 Attended RECOMB 2024 and presented our scGrapHiC: Deep learning-based graph deconvolution for Hi-C using single cell gene expression during the poster session.